O157 STEC
The 21 STEC O157 strains included in this reference set represent the 9 different clades identified in our prior study (https://doi.org/10.1073/pnas.0710834105).
| Accession Number | Strain Name | Clade (SNP type) | Shiga toxin gene(s) |
|---|---|---|---|
| TW08264 | Sakai outbreak strain | 1 (1) | 1, 2 |
| TW10022 | H2014 | 1 (2) | 1, 2 |
| TW04863 | 93-111 outbreak strain | 2 (9) | 1, 2 |
| TW08616 | EK8 | 2 (4) | 1, 2 |
| TW10012 | F6854 | 2 (7) | 1, 2 |
| TW02302 | EDL-933 outbreak strain | 3 (12) | 1, 2 |
| TW07957 | DA-31 | 3 (14) | 1, 2 |
| TW08613 | EK5 | 3 (13) | 1, 2 |
| TW11015 | MI02-88 | 4 (19) | 1, 2, 2c |
| TW11052 | MI02-39 | 4 (20) | 1, 2, 2c |
| TW10246 | MI02-74 | 5 (23) | 2, 2c |
| TW07520 | 1541 | 6 (25) | 1 |
| TW01663 | 87-1163 | 7 (29) | 1, 2c |
| TW02883 | E32511 | 8 (31) | 2, 2c |
| TW07945 | DA-19 | 8 (33) | 2 |
| TW09098 | MI03-35 | 8 (32) | 2 |
| TW11032 | MI02-55 | 8 (30) | 2 |
| TW05356 | G5101 | 9 (35) | 1, 2c |
| TW06591 | CB1009 | 9 (36) | - |
| TW05353 | 5905 | 9 (39) | 2c |
| TW03293 | ECOR-37 | 9 (37) | - |