DEC set
This collection of isolates comprises a diverse and well-studied group of diarrheagenic E. coli from human and animal sources. The strains were initially characterized by multilocus sequence typing (10.1038/35017546) and the genomes have been sequenced (10.1128/jb.00426-12).
| Accession Number | Strain Name | O-antigen | H-antigen | Source |
|---|---|---|---|---|
| TW00588 | DEC 01A | 55 | 6 | human (infant) |
| TW03154 | DEC 01B | 55 | 6 | human (infant) |
| TW01279 | DEC 01C | 55 | 6 | human (infant) |
| TW07653 | DEC 01D | 55 | 6 | human (infant) |
| TW00398 | DEC 01E | 55 | 6 | human |
| TW00460 | DEC 02A | 55 | 6 | human (infant) |
| TW00197 | DEC 02B | 55 | [6] | human (infant) |
| TW00591 | DEC 02C | 55 | 6 | human (infant) |
| TW01280 | DEC 02D | 55 | 6 | human (infant) |
| TW00177 | DEC 02E | 55 | 6 | human |
| TW00850 | DEC 03A | 157 | 7 | human |
| TW03772 | DEC 03B | 157 | 7 | human |
| TW02702 | DEC 03C | 157 | 7 | human |
| TW01788 | DEC 03D | 157 | 7 | human |
| TW02701 | DEC 03E | 157 | 7 | human |
| TW06555 | DEC 03F | 157 | NM | human (child) |
| TW01286 | DEC 04A | 157 | 7 | cow (calf) |
| TW01291 | DEC 04B | 157 | 7 | human |
| TW01288 | DEC 04C | 157 | 7 | buffalo |
| TW01289 | DEC 04D | 157 | 7 | cow (calf) |
| TW01290 | DEC 04E | 157 | 7 | human |
| TW02302 | DEC 04F | 157 | 7 | hamburger |
| TW00587 | DEC 05A | 55 | 7 | human (infant) |
| TW02719 | DEC 05B | 55 | 7 | human (infant) |
| TW01959 | DEC 05C | 55 | 7 | human (infant) |
| TW00947 | DEC 05D | 55 | 7 | human |
| TW00962 | DEC 05E | 55 | 7 | human |
| TW00073 | DEC 06A | 111 | 21 | human (infant) |
| TW00047 | DEC 06C | 111 | 12 | human |
| TW07654 | DEC 06D | 111 | 4 | human |
| TW00174 | DEC 06E | 111 | h4 | human |
| TW00601 | DEC 07A | 157 | 43 | pig |
| TW02844 | DEC 07B | 149 | NM | cow |
| TW00248 | DEC 07C | 157 | 43 | pig |
| TW00356 | DEC 07D | 157 | 43 | pig |
| TW00387 | DEC 07E | 157 | NM | pig |
| TW00046 | DEC 08A | 111ab | NM | human |
| TW00186 | DEC 08B | 111 | 8 | human |
| TW01378 | DEC 08C | 111 | [11] | cow (calf) |
| TW03810 | DEC 08D | 111 | 11 | human (infant) |
| TW03820 | DEC 08E | 111 | 8 | human (infant) |
| TW01206 | DEC 09A | 26 | 11 | human |
| TW01196 | DEC 09B | 26 | human | |
| TW00958 | DEC 09D | 26 | 11 | human (infant) |
| TW07655 | DEC 09E | 26 | 11 | human |
| TW02291 | DEC 10A | 26 | 11 | human |
| TW00971 | DEC 10B | 26 | 11 | human |
| TW01188 | DEC 10C | 26 | 11 | human (infant) |
| TW07615 | DEC 10D | ON | 9 | human |
| TW01597 | DEC 10E | 26 | 11 | cow (calf) |
| TW02981 | DEC 10F | 15 | [11] | rabbit |
| TW00664 | DEC 11A | 128 | 2 | human |
| TW00680 | DEC 11B | 128ab | 2 | human (infant) |
| TW00965 | DEC 11C | 45 | 2 | human |
| TW02885 | DEC 11D | 128 | 2 | human (infant) |
| TW02362 | DEC 11E | 128 | 2 | human (infant) |
| TW01277 | DEC 12A | 111 | 2 | human (infant) |
| TW00185 | DEC 12B | 111 | 2 | human |
| TW00063 | DEC 12C | 111 | NM | human (infant) |
| TW00206 | DEC 12D | 111 | 2 | human |
| TW00190 | DEC 12E | 111 | N | human |
| TW00676 | DEC 13A | 128 | 7 | human |
| TW00691 | DEC 13B | 128 | 7 | human |
| TW03970 | DEC 13C | 128 | 7 | human (infant) |
| TW03954 | DEC 13D | 128 | 7 | human (infant) |
| TW01100 | DEC 13E | 128 | 47 | human |
| TW03996 | DEC 14A | 128 | 21 | human (infant) |
| TW03981 | DEC 14B | 128 | 21 | human (infant) |
| TW01114 | DEC 14C | 128ac | 21 | human |
| TW00659 | DEC 14D | 128 | NM | human |
| TW03979 | DEC 14E | 128 | 21 | human (infant) |
| TW00074 | DEC 15A | 111 | 21 | human |
| TW00065 | DEC 15B | 111 | 21 | human |
| TW00055 | DEC 15C | 111 | 21 | human |
| TW00182 | DEC 15D | 111 | 21 | human |
| TW00180 | DEC 15E | 111 | 21 | human |