ECOR set
The E. coli Reference (ECOR) Collection consists of 72 strains recovered from a range of hosts in different geographic locations. The collection was initially established to represent the diversity of the commensal E. coli population. The genomes for each strain have been sequenced and are available at: https://doi.org/10.1128/mra.01133-18
| Accession Number | Strain name | O-antigen | H-type | Host |
|---|---|---|---|---|
| TW03268 | ECOR-1 | NT | NM | human |
| TW03269 | ECOR-2 | NT | 32 | human |
| TW03270 | ECOR-3 | 1 | NM | dog |
| TW03271 | ECOR-4 | NT | NM | human |
| TW03272 | ECOR-5 | 79 | NM | human |
| TW03273 | ECOR-6 | N | NM | human |
| TW02045 | ECOR-7 | 85 | NM | orangutan |
| TW03274 | ECOR-8 | 86 | NM | human |
| TW03275 | ECOR-9 | N | NM | human |
| TW03276 | ECOR-10 | 6 | 10 | human |
| TW03277 | ECOR-11 | 6 | 10 | human |
| TW02046 | ECOR-12 | 7 | 32 | human |
| TW03278 | ECOR-13 | N | - | human |
| TW02047 | ECOR-14 | M | - | human |
| TW03279 | ECOR-15 | 25 | NM | human |
| TW03280 | ECOR-16 | ON | 10 | leopard |
| TW03281 | ECOR-17 | 106 | NM | pig |
| TW03282 | ECOR-18 | 5 | NM | ape |
| TW02048 | ECOR-19 | 5 | - | ape |
| TW03283 | ECOR-20 | 89 | - | steer |
| TW03284 | ECOR-21 | 121 | - | steer |
| TW03285 | ECOR-22 | N | - | steer |
| TW03286 | ECOR-23 | 86 | 43 | elephant |
| TW02049 | ECOR-24 | 15 | NM | human |
| TW02050 | ECOR-25 | N | - | dog |
| TW02051 | ECOR-26 | 104 | 21 | human |
| TW03287 | ECOR-27 | 104 | NM | giraffe |
| TW03288 | ECOR-28 | 104 | 2 | human |
| TW03289 | ECOR-29 | 150 | 21 | k-rat |
| TW02052 | ECOR-30 | 113 | 21 | bison |
| TW03290 | ECOR-31 | 79 | 43 | leopard |
| TW03291 | ECOR-32 | 7 | 21 | giraffe |
| TW02053 | ECOR-33 | 7 | 21 | sheep |
| TW03292 | ECOR-34 | 88 | NM | dog |
| TW02054 | ECOR-35 | 1 | NM | human |
| TW02055 | ECOR-36 | 79 | 25 | human |
| TW03293 | ECOR-37 | NT | NM | marmoset |
| TW02056 | ECOR-38 | 7 | NM | human |
| TW03294 | ECOR-39 | 7 | NM | human |
| TW03295 | ECOR-40 | 7 | NM | human |
| TW02057 | ECOR-41 | 7 | NM | human |
| TW02058 | ECOR-42 | N | 26 | human |
| TW02059 | ECOR-43 | N | - | human |
| TW03296 | ECOR-44 | N | - | cougar |
| TW02060 | ECOR-45 | ON | M | pig |
| TW03297 | ECOR-46 | 1 | 6 | ape |
| TW03298 | ECOR-47 | OM | 18 | sheep |
| TW02061 | ECOR-48 | N | M | human |
| TW03299 | ECOR-49 | 2 | NM | human |
| TW03300 | ECOR-50 | 2 | - | human |
| TW02062 | ECOR-51 | 25 | - | human |
| TW03306 | ECOR-52 | 25 | 1 | orangutan |
| TW03307 | ECOR-53 | 4 | - | human |
| TW03308 | ECOR-54 | 25 | 1 | human |
| TW03309 | ECOR-55 | 25 | 1 | human |
| TW03310 | ECOR-56 | 6 | 1 | human |
| TW03311 | ECOR-57 | N | NM | gorilla |
| TW02063 | ECOR-58 | 112 | 8 | lion |
| TW02064 | ECOR-59 | 4 | 40 | human |
| TW03312 | ECOR-60 | 4 | - | human |
| TW03313 | ECOR-61 | 2 | NM | human |
| TW03314 | ECOR-62 | 2 | NM | human |
| TW03315 | ECOR-63 | N | NM | human |
| TW07656 | ECOR-64 | 75 | NM | human |
| TW02065 | ECOR-65 | N | 10 | ape |
| TW03316 | ECOR-66 | 4 | 40 | ape |
| TW02066 | ECOR-67 | 4 | 43 | goat |
| TW02067 | ECOR-68 | N | NM | giraffe |
| TW03317 | ECOR-69 | N | NM | ape |
| TW02068 | ECOR-70 | 78 | NM | gorilla |
| TW02069 | ECOR-71 | 78 | NM | human |
| TW02070 | ECOR-72 | 144 | 8 | human |